BINA

SOX genesare master regulatory genes controlling development and are fundamental to the establishment of sex determination in a multitude of organisms. The discovery of the master sex-determining gene SRY in 1990 was pivotal for the understanding of how testis development is initiated in mammals. With this discovery, an entire family of SOX factors were uncovered that play crucial roles in cell fate decisions during development. The importance of SOX genes in human reproductive development is evident from the various disorders of sex development (DSD) upon loss or overexpression of SOX gene function. Here, we review the roles that SOX genes play in gonad development and their involvement in DSD. We start with an overview of sex determination and differentiation, DSDs, and the SOX gene family and function. We then provide detailed information and discussion on SOX genes that have been …

We present a novel method that we call FAINE, fast artificial intelligence neutron detection system. FAINE automatically classifies tracks of fast neutrons on CR-39 detectors using a deep learning model. This method was demonstrated using a LANDAUER Neutrak® fast neutron dosimetry system, which is installed in the External Dosimetry Laboratory (EDL) at Soreq Nuclear Research Center (SNRC). In modern fast neutron dosimetry systems, after the preliminary stages of etching and imaging of the CR-39 detectors, the third stage uses various types of computer vision systems combined with a manual revision to count the CR-39 tracks and then convert them to a dose in mSv units. Our method enhances these modern systems by introducing an innovative algorithm, which uses deep learning to classify all CR-39 tracks as either real neutron tracks or any other sign such as dirt, scratches, or even cleaning remainders. This new algorithm makes the third stage of manual CR-39 tracks revision superfluous and provides a completely repeatable and accurate way of measuring either neutrons flux or dose. The experimental results show a total accuracy rate of 96.7% for the true positive tracks and true negative tracks detected by our new algorithm against the current method, which uses computer vision followed by manual revision. This algorithm is now in the process of calibration for both alpha-particles detection and fast neutron spectrometry classification and is expected to be very useful in analyzing results of proton-boron11 fusion experiments. Being fully automatic, the new algorithm will enhance the quality assurance and effectiveness of …

Fog accumulation on surfaces typically has a negative effect by reducing their transparency and efficiency. Applications such as plastic packaging, agricultural films, and particularly many optical devices suffer from these negative effects. One way to prevent fogging is to coat the substrate with an antifogging coating having a smooth surface and hydrophilic surface chemical groups. This causes the fog water droplets that come into contact with the substrate to completely flatten across its surface, thus retaining transparency. These coatings are mostly relegated to laboratory research due to their insufficient stability and costly synthetic processes. We proposed the use of organically modified silica particles consisting of a mixture of tetraethyl orthosilicate and methacryloxypropyltriethoxysilane, which were grown in situ in the presence of a corona-activated polyethylene film, thus providing a thin siloxane coating …

The immune system matures throughout childhood to achieve full functionality in protecting our bodies against threats. The immune system has a strong reciprocal symbiosis with the host bacterial population and the two systems co-develop, shaping each other. Despite their fundamental role in health physiology, the ontogeny of these systems is poorly characterized. In this study, we investigated the development of the BCR repertoire by analyzing high-throughput sequencing of their receptors in several time points of young C57BL/6J mice. In parallel, we explored the development of the gut microbiome. We discovered that the gut IgA repertoires change from birth to adolescence, including an increase in CDR3 lengths and somatic hypermutation levels. This contrasts with the spleen IgM repertoires that remain stable and distinct from the IgA repertoires in the gut. We also discovered that large clones that germinate …

Magnesium ion (Mg2+) is one of the most significant cations in living systems with involvement in many biochemical reactions and cellular processes and hence, sensitive and specific detection of Mg2+ is therefore essential for various applications. Here, we report the solvothermal synthesis of boron‐doped carbon dots (BC10) with more oxygen surface states by using salicylaldehyde and naphthalene‐1‐boronic acid. The as‐prepared BC10 showed greenish‐white luminescence under 365 nm UV illumination with quantum yield (QY) of 5.5 % at optimum dilution with dimethyl sulfur oxide (DMSO) solvent. The BC10 in DMSO (DS‐BC10) have shown high selectivity and sensitivity towards Mg2+ ion through the increased PL intensity due to chelation‐enhanced photoluminescence (CHEP). The enhanced PL intensity was further supported by the increased QY by a factor of 12 after the addition of Mg2+ ions to 65 …

Uncertainty relations play a crucial role in quantum mechanics. A well-defined method exists for deriving such uncertainties for pairs of observables. It does not include, however, an important family of fundamental relations: the time-energy uncertainty relations. As a result, different approaches have been used for obtaining them in diversified scenarios. The one of interest here revolves around the idea of the existence or inexistence of a minimum duration for an energy measurement with a certain precision. In our study, we use the Page and Wooters timeless framework to investigate how energy measurements modify the relative "flow of time" between internal and external clocks. This provides a unified framework for discussing the topic, recovering previous results and leading to new ones. We also show that the evolution of the external clock with respect to the internal one is non-unitary.

The nanoscale structure of equimolar binary mixtures [C 12 mim] 0.5 [C n mim] 0.5 [NTf 2] was studied by small-angle X-ray scattering for n= 1-22 and T= 293-373 K. All mixtures exhibit local layering and layer-normal thermal contraction with increasing T, as found for the pure components. The layer-parallel spacings of the polar headgroups and of the alkyl chains vary minimally with n over the full n range. The layer-normal spacing d I at high n follows closely, with a 1–1.5 Å downshift, the increasing trend of the pure longer component’s d I, indicating its dominance of the layering. At low n, d I at n= 1 greatly exceeds d I of the pure longer component, n= 12, and decreases sharply with increasing n, indicating a structure akin to lipid bilayer solutions. At intermediate n, d I is roughly constant, lying 1–1.5 Å below d I of n= 12. Our layer spacings provide a near-unique opportunity to study the evolution over a wide n-range …

Lysozyme is widely known to promote the formation of condensed silica networks from solutions containing silicic acid, in a reproducible and cost-effective way. However, little is known about the fate of the protein after the formation of the silica particles. Also, the relative arrangement of the different components in the resulting material is a matter of debate. In this study, we investigate the nature of the protein–silica interactions by means of solid-state nuclear magnetic resonance spectroscopy, small-angle X-ray scattering, and electron microscopy. We find that lysozyme and silica are in intimate contact and strongly interacting, but their interaction is neither covalent nor electrostatic: lysozyme is mostly trapped inside the silica by steric effects.

Purpose: Stem cells replacement therapy is becoming a promising pursued avenue for vision restoration in people with degenerative diseases of the outer retina. However, the integration and survival of the transplanted cells and the formation of fully functioning synapses remain a challenge. Our aim is to develop an in-vitro experimental paradigm which will allow us to address these issues while working under experimentally controlled conditions and avoiding immune system reactions faced in-vivoMethods: As a first step, we are utilizing organotypic retinal cultures from transgenic rats expressing the calcium indicator GCaMP6f while monitoring the survival of the retinal ganglion cells (RGCs) using both extracellular recordings (multi electrode arrays), and calcium imaging at various time points.Results: Our calcium imaging revealed robust spontaneous activity of the RGCs up to 72hrs, albeit decreasing throughout …

Stress granules (SGs) can assemble in cancer cells upon chemotoxic stress. Glucocorticoids function during stress responses and are administered with chemotherapies. The roles of glucocorticoids in SG assembly and disassembly pathways are unknown. We examined whether combining glucocorticoids such as cortisone with chemotherapies from the vinca-alkaloid family that dismantle the microtubule network, will affect SG assembly and disassembly pathways and influence cell viability in cancer cells and in human-derived organoids. Cortisone augmented SG formation when combined with Vinorelbine (VRB). Live-cell imaging showed that cortisone increased SG assembly rates but reduced SG clearance rates after stress, by increasing protein residence times within the SGs. Mechanistically, VRB and cortisone signaled through the eIF2α-mediated integrated stress response yet induced different kinases …

Many organisms have an elastic skeleton that consists of a closed shell of epithelial cells that is filled with fluid, and can actively regulate both elastic forces in the shell and hydrostatic pressure inside it. In this work we introduce a simple network model of such pressure-stabilized active elastic shells in which cross-links are represented by material points connected by non-linear springs of some given equilibrium lengths and spring constants. We mimic active contractile forces in the system by changing the parameters of randomly chosen springs and use computer simulations to study the resulting local and global deformation dynamics of the network. We elucidate the statistical properties of these deformations by computing the corresponding distributions and correlation functions. We show that pressure-induced stretching of the network introduces coupling between its local and global behavior: while the network …

The two-dimensional electron system found between LaAlO3 and SrTiO3 hosts a variety of physical phenomena that can be tuned through external stimuli. This allows for electronic devices controlling magnetism, spin–orbit coupling, and superconductivity. Controlling the electron density by varying donor concentrations and using electrostatic gating are convenient handles to modify the electronic properties, but the impact on the microscopic scale, particularly of the former, remains underexplored. Here, we image the current distribution at 4.2 K in amorphous-LaAlO3/SrTiO3 using scanning superconducting quantum interference device microscopy while changing the carrier density in situ using electrostatic gating and oxygen annealing. We show how potential disorder affects the current and how homogeneous 2D flow evolves into several parallel conducting channels when approaching the metal-to-insulator …