BINA

4685 articles

79 publishers

Join mailing list

Feb 2023 • IEEE Transactions on Applied Superconductivity

Effect of magnetic fields on superconducting microwave coplanar resonators

A Roitman, A Shaulov, Y Yeshurun

Coplanar microwave resonators made of NbN and YBa 2 Cu 3 O 7-δ show similar behavior under the influence of magnetic field. In particular, the two resonators exhibit marked difference between zero-field-cooled (ZFC) and field-cooled (FC) measurements, which is attributed to the presence of screening currents in ZFC but not in FC measurements.

Show more

Feb 2023 • Journal of medicinal chemistry

Aza-Residue Modulation of Cyclic d,l-α-Peptide Nanotube Assembly with Enhanced Anti-Amyloidogenic Activity

Maram Habashi, Pradeep S Chauhan, Suresh Vutla, Sudipta Senapati, Mykhailo Diachkov, Ali El-Husseini, Brigitte Guérin, William D Lubell, Shai Rahimipour

Transient soluble oligomers of amyloid-β (Aβ) are considered among the most toxic species in Alzheimer’s disease (AD). Soluble Aβ oligomers accumulate early prior to insoluble plaque formation and cognitive impairment. The cyclic d,l-α-peptide CP-2 (1) self-assembles into nanotubes and demonstrates promising anti-amyloidogenic activity likely by a mechanism involving engagement of soluble oligomers. Systematic replacement of the residues in peptide 1 with aza-amino acid counterparts was performed to explore the effects of hydrogen bonding on propensity to mitigate Aβ aggregation and toxicity. Certain azapeptides exhibited improved ability to engage, alter the secondary structure, and inhibit aggregation of Aβ. Moreover, certain azapeptides disassembled preformed Aβ fibrils and protected cells from Aβ-mediated toxicity. Substitution of the l-norleucine3 and d-serine6 residues in peptide 1 with aza …

Show more

Feb 2023 • ACS Macro Letters

Elasticity of Slide-Ring Gels

Danyang Chen, Sergey Panyukov, Liel Sapir, Michael Rubinstein

Slide-ring gels are polymer networks with cross-links that can slide along the chains. In contrast to conventional unentangled networks with cross-links fixed along the chains, the slide-ring networks are strain-softening and distribute tension much more uniformly between their strands due to the so-called “pulley effect”. The sliding of cross-links also reduces the elastic modulus in comparison with the modulus of conventional networks with the same number density of cross-links and elastic strands. We develop a single-chain model to account for the redistribution of monomers between network strands of a primary chain. This model takes into account both the pulley effect and fluctuations in the number of monomers per network strand. The pulley effect leads to modulus reduction and uniform tension redistribution between network strands, while fluctuations in the number of strand monomers dominate the strain …

Show more

Feb 2023 • Physical Review Research

Countering a fundamental law of attraction with quantum wave-packet engineering

Gal Amit, Yonathan Japha, Tomer Shushi, Ron Folman, Eliahu Cohen

Cold atoms hold much promise for the realization of quantum technologies, but still encounter many challenges. In this work we show how the fundamental Casimir-Polder force, by which atoms are attracted to a surface, may be temporarily suppressed by utilizing a specially designed quantum potential, which is familiar from the hydrodynamic or Bohmian reformulations of quantum mechanics. We show that when harnessing the quantum potential via suitable atomic wave-packet engineering, the absorption by the surface can be dramatically reduced. As a result, the probing time of the atoms as sensors can increase. This is proven both analytically and numerically. Furthermore, an experimental scheme is proposed for achieving the required shape for the atomic wave packet. All these may assist existing applications of cold atoms in metrology and sensing and may also enable prospective ones. Finally, these …

Show more

Feb 2023 • Frontiers in Microbiology

Comparative genomics of Bacillus cereus sensu lato spp. biocontrol strains in correlation to in-vitro phenotypes and plant pathogen antagonistic capacity

Maya Moshe, Chhedi Lal Gupta, Rakeshkumar Manojkumar Jain, Noa Sela, Dror Minz, Ehud Banin, Omer Frenkel, Eddie Cytryn

Bacillus cereus sensu lato (Bcsl) strains are widely explored due to their capacity to antagonize a broad range of plant pathogens. These include B. cereus sp. UW85, whose antagonistic capacity is attributed to the secondary metabolite Zwittermicin A (ZwA). We recently isolated four soil and root-associated Bcsl strains (MO2, S−10, S-25, LSTW-24) that displayed different growth profiles and in-vitro antagonistic effects against three soilborne plant pathogens models: Pythium aphanidermatum (oomycete) Rhizoctonia solani (basidiomycete), and Fusarium oxysporum (ascomycete). To identify genetic mechanisms potentially responsible for the differences in growth and antagonistic phenotypes of these Bcsl strains, we sequenced and compared their genomes, and that of strain UW85 using a hybrid sequencing pipeline. Despite similarities, specific Bcsl strains had unique secondary metabolite and chitinase-encoding genes that could potentially explain observed differences in in-vitro chitinolytic potential and anti-fungal activity. Strains UW85, S-10 and S-25 contained a (~500 Kbp) mega-plasmid that harbored the ZwA biosynthetic gene cluster. The UW85 mega-plasmid contained more ABC transporters than the other two strains, whereas the S-25 mega-plasmid carried a unique cluster containing cellulose and chitin degrading genes. Collectively, comparative genomics revealed several mechanisms that can potentially explain differences in in-vitro antagonism of Bcsl strains toward fungal plant pathogens.

Show more

Feb 2023 • arXiv preprint arXiv:2302.00726

Quantum Engines and Refrigerators

Loris Maria Cangemi, Chitrak Bhadra, Amikam Levy

Engines are systems and devices that convert one form of energy into another, typically into a more useful form that can perform work. In the classical setup, physical, chemical, and biological engines largely involve the conversion of heat into work. This energy conversion is at the core of thermodynamic laws and principles and is codified in textbook material. In the quantum regime, however, the principles of energy conversion become ambiguous, since quantum phenomena come into play. As with classical thermodynamics, fundamental principles can be explored through engines and refrigerators, but, in the quantum case, these devices are miniaturized and their operations involve uniquely quantum effects. Our work provides a broad overview of this active field of quantum engines and refrigerators, reviewing the latest theoretical proposals and experimental realizations. We cover myriad aspects of these devices, starting with the basic concepts of quantum analogs to the classical thermodynamic cycle and continuing with different quantum features of energy conversion that span many branches of quantum mechanics. These features include quantum fluctuations that become dominant in the microscale, non-thermal resources that fuel the engines, and the possibility of scaling up the working medium's size, to account for collective phenomena in many-body heat engines. Furthermore, we review studies of quantum engines operating in the strong system-bath coupling regime and those that include non-Markovian phenomena. Recent advances in thermoelectric devices and quantum information perspectives, including quantum measurement …

Show more

Feb 2023 • Physical Review E

Brownian particles in periodic potentials: Coarse-graining versus fine structure

Lucianno Defaveri, Eli Barkai, David A Kessler

We study the motion of an overdamped particle connected to a thermal heat bath in the presence of an external periodic potential in one dimension. When we coarse-grain, ie, bin the particle positions using bin sizes that are larger than the periodicity of the potential, the packet of spreading particles, all starting from a common origin, converges to a normal distribution centered at the origin with a mean-squared displacement that grows as 2 D* t, with an effective diffusion constant that is smaller than that of a freely diffusing particle. We examine the interplay between this coarse-grained description and the fine structure of the density, which is given by the Boltzmann-Gibbs (BG) factor e− V (x)/k B T, the latter being nonnormalizable. We explain this result and construct a theory of observables using the Fokker-Planck equation. These observables are classified as those that are related to the BG fine structure, like the …

Show more

Feb 2023 • Cold Spring Harbor Protocols

Single-pair courtship and competition assays in Drosophila

Anne C von Philipsborn, Galit Shohat-Ophir, Carolina Rezaval

Courtship in Drosophila melanogaster involves a series of innate, complex behaviors that allow male and female flies to exchange sensory information and assess the quality of a potential mate. Although highly robust and stereotypical, courtship behaviors can be modulated by internal state and experience. This protocol describes methods for designing and carrying out experiments that measure courtship performance in single-pair assays, in which a male is paired with a female, or in competitive assays, in which a male is presented with a female and with a male competitor. It also includes approaches for measuring female sexual receptivity during courtship.

Show more

Feb 2023 • Nano-Structures & Nano-Objects

Nano-apertures vs. nano-barriers: Surface scanning through obstacles and super-resolution in AFM-NSOM dual-mode

Jérémy Belhassen, David Glukhov, Matityahu Karelits, Zeev Zalevsky, Avi Karsenty

As part of the performance characterization of a combined and enhanced new AFM-NSOM tip-photo-detector, diffraction limitations were studied on two complementary samples: a nano-barrier embedded between two nano-apertures and one nano-aperture embedded between two nano-barriers. These consecutive multiple-obstacle scanning paths are part of this challenging specifications study of a new conical-shaped and drilled tip-photodetector, sharing a subwavelength aperture. A super-resolution algorithm feature was added in order to overcome possible obstacles, while scanning the same object with several small angles. The new multi-mode system includes scanning topography, optical imaging and an obstacle-overcoming algorithm. The present article study emphasizes the complexity of nano-scanning multiple-apertures/barriers. Both complementary analytical (Python) and numerical (Comsol …

Show more

Feb 2023 • Nature communications

Phonon-driven intra-exciton Rabi oscillations in CsPbBr3 halide perovskites

Xuan Trung Nguyen, Katrin Winte, Daniel Timmer, Yevgeny Rakita, Davide Raffaele Ceratti, Sigalit Aharon, Muhammad Sufyan Ramzan, Caterina Cocchi, Michael Lorke, Frank Jahnke, David Cahen, Christoph Lienau, Antonietta De Sio

Coupling electromagnetic radiation with matter, e.g., by resonant light fields in external optical cavities, is highly promising for tailoring the optoelectronic properties of functional materials on the nanoscale. Here, we demonstrate that even internal fields induced by coherent lattice motions can be used to control the transient excitonic optical response in CsPbBr3 halide perovskite crystals. Upon resonant photoexcitation, two-dimensional electronic spectroscopy reveals an excitonic peak structure oscillating persistently with a 100-fs period for up to ~2 ps which does not match the frequency of any phonon modes of the crystals. Only at later times, beyond 2 ps, two low-frequency phonons of the lead-bromide lattice dominate the dynamics. We rationalize these findings by an unusual exciton-phonon coupling inducing off-resonant 100-fs Rabi oscillations between 1s and 2p excitons driven by the low-frequency …

Show more

Feb 2023 • Batteries 9 (2), 110, 2023

Recent progress in solid electrolytes for all-solid-state metal (Li/Na)–sulfur batteries

Ravindra Kumar Bhardwaj, David Zitoun

Metal–sulfur batteries, especially lithium/sodium–sulfur (Li/Na-S) batteries, have attracted widespread attention for large-scale energy application due to their superior theoretical energy density, low cost of sulfur compared to conventional lithium-ion battery (LIBs) cathodes and environmental sustainability. Despite these advantages, metal–sulfur batteries face many fundamental challenges which have put them on the back foot. The use of ether-based liquid electrolyte has brought metal–sulfur batteries to a critical stage by causing intermediate polysulfide dissolution which results in poor cycling life and safety concerns. Replacement of the ether-based liquid electrolyte by a solid electrolyte (SEs) has overcome these challenges to a large extent. This review describes the recent development and progress of solid electrolytes for all-solid-state Li/Na-S batteries. This article begins with a basic introduction to metal–sulfur batteries and explains their challenges. We will discuss the drawbacks of the using liquid organic electrolytes and the advantages of replacing liquid electrolytes with solid electrolytes. This article will also explain the fundamental requirements of solid electrolytes in meeting the practical applications of all solid-state metal–sulfur batteries, as well as the electrode–electrolyte interfaces of all solid-state Li/Na-S batteries.

Show more

Feb 2023 • arXiv preprint arXiv:2302.00650

Multipartite entanglement detection via correlation minor norm

Rain Lenny, Amit Te'eni, Bar Y Peled, Avishy Carmi, Eliahu Cohen

Entanglement is a uniquely quantum resource giving rise to many quantum technologies. It is therefore important to detect and characterize entangled states, but this is known to be a challenging task, especially for multipartite mixed states. The correlation minor norm (CMN) was recently suggested as a bipartite entanglement detector employing bounds on the quantum correlation matrix. In this paper we explore generalizations of the CMN to multipartite systems based on matricizations of the correlation tensor. It is shown that the CMN is able to detect and differentiate classes of multipartite entangled states. We further analyze the correlations within the reduced density matrices and show their significance for entanglement detection. Finally, we employ matricizations of the correlation tensor for introducing a measure of global quantum discord.

Show more

Feb 2023 • Nano-Structures & Nano-Objects

Nano-apertures vs. nano-barriers: Surface scanning through obstacles and super-resolution in AFM-NSOM dual-mode

Jérémy Belhassen, David Glukhov, Matityahu Karelits, Zeev Zalevsky, Avi Karsenty

As part of the performance characterization of a combined and enhanced new AFM-NSOM tip-photo-detector, diffraction limitations were studied on two complementary samples: a nano-barrier embedded between two nano-apertures and one nano-aperture embedded between two nano-barriers. These consecutive multiple-obstacle scanning paths are part of this challenging specifications study of a new conical-shaped and drilled tip-photodetector, sharing a subwavelength aperture. A super-resolution algorithm feature was added in order to overcome possible obstacles, while scanning the same object with several small angles. The new multi-mode system includes scanning topography, optical imaging and an obstacle-overcoming algorithm. The present article study emphasizes the complexity of nano-scanning multiple-apertures/barriers. Both complementary analytical (Python) and numerical (Comsol …

Show more

Feb 2023 • arXiv preprint arXiv:2302.00705

Quantum circuits measuring weak values and Kirkwood-Dirac quasiprobability distributions, with applications

Rafael Wagner, Zohar Schwartzman-Nowik, Ismael L Paiva, Amit Te'eni, Antonio Ruiz-Molero, Rui Soares Barbosa, Eliahu Cohen, Ernesto F Galvão

Weak values and Kirkwood--Dirac (KD) quasiprobability distributions have been independently associated with both foundational issues in quantum theory and advantages in quantum metrology. We propose simple quantum circuits to measure weak values, KD distributions, and density matrix spectra without the need for post-selection. This is achieved by measuring unitary-invariant, relational properties of quantum states, as functions of Bargmann invariants. Our circuits also enable direct experimental implementation of various applications of KD distributions, such as out-of-time-ordered correlators (OTOCs) and the quantum Fisher information in post-selected parameter estimation, among others. This results in a unified view of nonclassicality in all those tasks. In particular, we discuss how negativity and imaginarity of Bargmann invariants relate to set coherence.

Show more

Feb 2023 • Angewandte Chemie (International ed. in English)

Peptide Bond Formation in the Protonated Serine Dimer Following Vacuum UV Photon‐Induced Excitation

Ori Licht, Dario Barreiro-Lage, Patrick Rousseau, Alexandre Giuliani, Aleksandar Milosavljevic, Avinoam Isaak, Yitzhak Mastai, Amnon Albeck, Raj Singh, Vy Nguyen, Laurent Nahon, Lara Martinez, Sergio Díaz-Tendero, Yoni Toker

Possible routes for intra-cluster bond formation (ICBF) in protonated serine dimers have been studied. We found no evidence of ICBF following low energy collision induced dissociation (in correspondence with previous works), however, we do observe clear evidence for ICBF following photon absorption in the eV range. Moreover, the comparison of photon induced dissociation measurements of the protonated serine dimer to those of a protonated serine dipeptide provides evidence that ICBF, in this case, involves peptide bond formation (PBF). The experimental results are supported by {\it ab initio} molecular dynamics and exploration of several excited state potential energy surfaces, unravelling a pathway for PBF following photon absorption. The combination of experiments and theory provides insight into the PBF mechanisms in clusters of amino acids, and reveals the importance of electronic excited states reached upon UV/VUV light excitation.

Show more

Feb 2023 • Cold Spring Harbor Protocols

Measurement of Drosophila Reproductive Behaviors

Anne C von Philipsborn, Galit Shohat-Ophir, Carolina Rezaval

Courtship behaviors in Drosophila melanogaster are innate and contain highly stereotyped but also experience-and state-dependent elements. They have been the subject of intense study for more than 100 years. The power of Drosophila as a genetic experimental system has allowed the dissection of reproductive behaviors at a molecular, cellular, and physiological level. As a result, we know a great deal about how flies perceive sensory cues from potential mates, how this information is integrated in higher brain centers to execute reproductive decisions, and how state and social contexts modulate these responses. The simplicity of the assay has allowed for its broad application. Here, we introduce methods for studying male and female innate reproductive behaviors as well as their plastic responses.

Show more

Feb 2023 • The Journal of Physical Chemistry B

Experimental Data Confirm Carrier-Cascade Model for Solid-State Conductance across Proteins

Eszter Papp, Gábor Vattay, Carlos Romero-Muñiz, Linda A Zotti, Jerry A Fereiro, Mordechai Sheves, David Cahen

The finding that electronic conductance across ultrathin protein films between metallic electrodes remains nearly constant from room temperature to just a few degrees Kelvin has posed a challenge. We show that a model based on a generalized Landauer formula explains the nearly constant conductance and predicts an Arrhenius-like dependence for low temperatures. A critical aspect of the model is that the relevant activation energy for conductance is either the difference between the HOMO and HOMO–1 or the LUMO+1 and LUMO energies instead of the HOMO–LUMO gap of the proteins. Analysis of experimental data confirms the Arrhenius-like law and allows us to extract the activation energies. We then calculate the energy differences with advanced DFT methods for proteins used in the experiments. Our main result is that the experimental and theoretical activation energies for these three different proteins …

Show more

Feb 2023 • npj Quantum Information

Fundamental quantum limits of magnetic nearfield measurements

Chen Mechel, Jonathan Nemirovsky, Eliahu Cohen, Ido Kaminer

Major advances in the precision of magnetic measurements bring us closer to quantum detection of individual spins at the single-atom level. On the quest for reducing both classical and quantum measurement noise, it is intriguing to look forward and search for precision limits arising from the fundamental quantum nature of the measurement process itself. Here, we present the limits of magnetic quantum measurements arising from quantum information considerations, and apply these limits to a concrete example of magnetic force microscopy (MFM). We show how such microscopes have a fundamental limit on their precision arising from the theory of imperfect quantum cloning, manifested by the entanglement between the measured system and the measurement probe. We show that counterintuitively, increasing the probe complexity decreases both the measurement noise and back action, and a judicious design …

Show more

Feb 2023 • Nature Communications

Phonon-driven intra-exciton Rabi oscillations in CsPbBr3 halide perovskites

Xuan Trung Nguyen, Katrin Winte, Daniel Timmer, Yevgeny Rakita, Davide Raffaele Ceratti, Sigalit Aharon, Muhammad Sufyan Ramzan, Caterina Cocchi, Michael Lorke, Frank Jahnke, David Cahen, Christoph Lienau, Antonietta De Sio

Coupling electromagnetic radiation with matter, e.g., by resonant light fields in external optical cavities, is highly promising for tailoring the optoelectronic properties of functional materials on the nanoscale. Here, we demonstrate that even internal fields induced by coherent lattice motions can be used to control the transient excitonic optical response in CsPbBr3 halide perovskite crystals. Upon resonant photoexcitation, two-dimensional electronic spectroscopy reveals an excitonic peak structure oscillating persistently with a 100-fs period for up to ~2 ps which does not match the frequency of any phonon modes of the crystals. Only at later times, beyond 2 ps, two low-frequency phonons of the lead-bromide lattice dominate the dynamics. We rationalize these findings by an unusual exciton-phonon coupling inducing off-resonant 100-fs Rabi oscillations between 1s and 2p excitons driven by the low-frequency …

Show more

Feb 2023

CRISPR-Cas9 RAG2 Correction via Coding Sequence Replacement to Preserve Endogenous Gene Regulation and Locus Structure

Daniel Allen, Orli Knop, Bryan Itkowitz, Ortal Iancu, Katia Beider, Yu Nee Lee, Arnon Nagler, Raz Somech, Ayal Hendel

RAG2-SCID is a primary immunode ciency caused by mutations in Recombination-activating gene 2 (RAG2), a gene intimately involved in the process of lymphocyte maturation and function. ex-vivo manipulation of a patient’s own hematopoietic stem and progenitor cells (HSPCs) using CRISPR-Cas9/rAAV6 gene editing could provide a therapeutic alternative to the only current treatment, allogeneic hematopoietic stem cell transplantation (HSCT). Here we show a rst-of-its-kind RAG2 correction strategy that replaces the entire endogenous coding sequence (CDS) to preserve the critical endogenous spatiotemporal gene regulation and locus architecture. Expression of the corrective transgene led to successful development into CD3+TCRαβ+ and CD3+TCRγδ+ T cells and promoted the establishment of highly diverse TRB and TRG repertoires in an in-vitro T-cell differentiation platform. We believe that a CDS replacement technique to correct tightly regulated genes, like RAG2, while maintaining critical regulatory elements and conserving the locus structure could bring safer gene therapy techniques closer to the clinic.

Show more

Feb 2023 • Journal of Power Sources

Lignin-derived bimetallic platinum group metal-free oxygen reduction reaction electrocatalysts for acid and alkaline fuel cells

Mohsin Muhyuddin, Ariel Friedman, Federico Poli, Elisabetta Petri, Hilah Honig, Francesco Basile, Andrea Fasolini, Roberto Lorenzi, Enrico Berretti, Marco Bellini, Alessandro Lavacchi, Lior Elbaz, Carlo Santoro, Francesca Soavi

Metal-nitrogen-carbons (M-N-Cs) as a reliable substitution for platinum-group-metals (PGMs) for oxygen reduction reaction (ORR) are emerging candidates to rationalize the technology of fuel cells. The development of M-N-Cs can further be economized by consuming waste biomass as an inexpensive carbon source for the electrocatalyst support. Herein, we report the simple fabrication and in-depth characterization of electrocatalysts using lignin-derived activated char. The activated char (LAC) was functionalized with metal phthalocyanine (FePc and MnPc) via atmosphere-controlled pyrolysis to produce monometallic M-N-Cs (L_Mn and L_Fe) and bimetallic M1-M2-N-Cs (L_FeMn) electrocatalysts. Raman spectroscopy and transmission electron microscopy (TEM) revealed a defect-rich architecture. XPS confirmed the coexistence of various nitrogen-containing active moieties. L_Fe and L_FeMn demonstrated …

Show more

logo
Articali

Powered by Articali

TermsPrivacy