BINA

The spectra of Brillouin scattering processes in optical fibers are affected by temperature, axial strain, and other quantities of interest. This dependence forms the basis for optical Brillouin scattering based optical fiber sensors. Since the first proposition of such sensors in 1989, several protocols have been established for the spatially distributed analysis of Brillouin scattering spectra along fibers installed in structures of interest. Sensor systems cover hundreds of kilometers, reach sub-millimeter resolution, follow dynamic vibrations at MHz rates, and resolve sub-degree temperature changes and micro-strain elongations. Optical fiber sensors represent the most successful commercial application of Brillouin scattering physics to-date. This chapter reviews the principles, state of the art, performance trade-offs and recent breakthroughs in Brillouin scattering-based optical fiber sensors.

Super-resolution optical fluctuation imaging (SOFI) is a highly democratizable technique that provides optical super-resolution without requirement of sophisticated imaging instruments. Easy-to-use open-source packages for SOFI are important to support the utilization and community adoption of the SOFI method, they also encourage the participation and further development of SOFI by new investigators. In this work, we developed PySOFI, an open-source Python package for SOFI analysis that offers the flexibility to inspect, test, modify, improve, and extend the algorithm. We provide complete documentation for the package and a collection of Jupyter Notebooks to demonstrate the usage of the package. We discuss the architecture of PySOFI and illustrate how to use each functional module. A demonstration on how to extend the PySOFI package with additional modules is also included in the PySOFI package. We …

Perovskite solar cells (PSCs) are being studied and developed because of the outstanding properties of halide perovskites as photovoltaic materials and high conversion efficiencies achieved with the best PSCs. However, leaching out of lead (Pb) ions into the environment presents potential public health risks. We show that thiol-functionalized nanoparticles provide an economic way of minimizing Pb leaching in the case of PSC module damage and subsequent water exposure (at most,∼ 2.5% of today's crystal silicon solar panel production cost per square meter). Using commercial materials and methods, we retain∼ 90% of Pb without degrading the photovoltaic performance of the cells, compared with nonencapsulated devices, yielding a worst-case scenario of top-soil pollution below natural Pb levels and well below the US Environmental Protection Agency limits.

Lysozyme is widely known to promote the formation of condensed silica networks from solutions containing silicic acid, in a reproducible and cost-effective way. However, little is known about the fate of the protein after the formation of the silica particles. Also, the relative arrangement of the different components in the resulting material is a matter of debate. In this study, we investigate the nature of the protein–silica interactions by means of solid-state nuclear magnetic resonance spectroscopy, small-angle X-ray scattering, and electron microscopy. We find that lysozyme and silica are in intimate contact and strongly interacting, but their interaction is neither covalent nor electrostatic: lysozyme is mostly trapped inside the silica by steric effects.

Perovskite solar cells (PSCs) are being studied and developed because of the outstanding properties of halide perovskites as photovoltaic materials and high conversion efficiencies achieved with the best PSCs. However, leaching out of lead (Pb) ions into the environment presents potential public health risks. We show that thiol-functionalized nanoparticles provide an economic way of minimizing Pb leaching in the case of PSC module damage and subsequent water exposure (at most, ∼2.5% of today’s crystal silicon solar panel production cost per square meter). Using commercial materials and methods, we retain ∼90% of Pb without degrading the photovoltaic performance of the cells, compared with nonencapsulated devices, yielding a worst-case scenario of top-soil pollution below natural Pb levels and well below the U.S. Environmental Protection Agency limits.

Magnetic hydrogels and soft composites have fuelled the development of next generation biomimetic soft robotics due to their precise control and non-cytotoxic nature. Bare magnetic nanoparticles are difficult to regulate via remote controlling whereas, when these nanoparticles are arrested inside polymeric matrices, the whole system become an artificial soft mussel like integrated system. Concurrently, these polymeric magnetic soft materials are also prone to response of external magnetic field (static or oscillatory). Additive manufacturing via spatial assembly of polymeric precursors followed by actuation like behaviour is quite a new manufacturing technique to fabricate magnetic soft materials. In this review, we focused on the magnetic nanoparticles and their entrapment into polymeric matrices and assessing their applicability in clinical (hyperthermia) as well as shape morphing behaviours. Both the behaviors …

Attempts to dope halide perovskites (HaPs) extrinsically have been mostly unsuccessful. Still, oxygen (O2) is an efficient p‐dopant for polycrystalline HaP films. To an extent, this doping is reversible, i.e., the films can be de‐doped by decreasing the O2 partial pressure. Here results are reported, aimed at understanding the mechanism of such reversible doping, as it has been argued that doping involves interaction of oxygen with defects inside bulk HaP. These experimental results clearly point out that O2‐surface interactions suffice to dope the bulk of the films. Such behavior fits what is known for other polycrystalline semiconductors, where surface charge transfer‐adducts can form and be removed. Thus, controlling the O2 partial pressure to which the HaP film is exposed, can, after proper encapsulation, achieve the desired bulk doping of the film.

Fibre lasers based on backward stimulated Brillouin scattering provide narrow linewidths and serve in signal processing and sensing applications. Stimulated Brillouin scattering in fibres takes place in the forward direction as well, with amplification bandwidths that are narrower by two orders of magnitude. However, forward Brillouin lasers have yet to be realized in any fibre platform. In this work, we report a first forward Brillouin fibre laser, using a bare off-the-shelf, panda-type polarisation maintaining fibre. Pump light in one principal axis provides Brillouin amplification for a co-propagating lasing signal of the orthogonal polarisation. Feedback is provided by Bragg gratings at both ends of the fibre cavity. Single-mode, few-modes and multi-mode regimes of operation are observed. The lasing threshold exhibits a unique environmental sensitivity: it is elevated when the fibre is partially immersed in water due to the …

The parasite Trypanosoma brucei causes African sleeping sickness that is fatal to patients if untreated. Parasite differentiation from a replicative slender form into a quiescent stumpy form promotes host survival and parasite transmission. Long noncoding RNAs (lncRNAs) are known to regulate cell differentiation in other eukaryotes. To determine whether lncRNAs are also involved in parasite differentiation, we used RNA sequencing to survey the T. brucei genome, identifying 1428 previously uncharacterized lncRNA genes. We find that grumpy lncRNA is a key regulator that promotes parasite differentiation into the quiescent stumpy form. This function is promoted by a small nucleolar RNA encoded within the grumpy lncRNA. snoGRUMPY binds to messenger RNAs of at least two stumpy regulatory genes, promoting their expression. grumpy overexpression reduces parasitemia in infected mice. Our analyses …

Nuclear speckles are nuclear bodies containing RNA-binding proteins as well as RNAs including long non-coding RNAs (lncRNAs). Maternally expressed gene 3 (MEG3) is a nuclear retained lncRNA found to associate with nuclear speckles. To understand the association dynamics of MEG3 lncRNA with nuclear speckles in living cells, we generated a fluorescently tagged MEG3 transcript that could be detected in real time. Under regular conditions, transient association of MEG3 with nuclear speckles was observed, including a nucleoplasmic fraction. Transcription or splicing inactivation conditions, known to affect nuclear speckle structure, showed prominent and increased association of MEG3 lncRNA with the nuclear speckles, specifically forming a ring-like structure around the nuclear speckles. This contrasted with metastasis-associated lung adenocarcinoma (MALAT1) lncRNA that is normally highly associated with nuclear speckles, which was released and dispersed in the nucleoplasm. Under normal conditions, MEG3 dynamically associated with the periphery of the nuclear speckles, but under transcription or splicing inhibition, MEG3 could also enter the center of the nuclear speckle. Altogether, using live-cell imaging approaches, we find that MEG3 lncRNA is a transient resident of nuclear speckles and that its association with this nuclear body is modulated by the levels of transcription and splicing activities in the cell.

Magnesium ion (Mg2+) is one of the most significant cations in living systems with involvement in many biochemical reactions and cellular processes and hence, sensitive and specific detection of Mg2+ is therefore essential for various applications. Here, we report the solvothermal synthesis of boron‐doped carbon dots (BC10) with more oxygen surface states by using salicylaldehyde and naphthalene‐1‐boronic acid. The as‐prepared BC10 showed greenish‐white luminescence under 365 nm UV illumination with quantum yield (QY) of 5.5 % at optimum dilution with dimethyl sulfur oxide (DMSO) solvent. The BC10 in DMSO (DS‐BC10) have shown high selectivity and sensitivity towards Mg2+ ion through the increased PL intensity due to chelation‐enhanced photoluminescence (CHEP). The enhanced PL intensity was further supported by the increased QY by a factor of 12 after the addition of Mg2+ ions to 65 …

Magnesium ion (Mg2+) is one of the most significant cations in living systems with involvement in many biochemical reactions and cellular processes and hence, sensitive and specific detection of Mg2+ is therefore essential for various applications. Here, we report the solvothermal synthesis of boron‐doped carbon dots (BC10) with more oxygen surface states by using salicylaldehyde and naphthalene‐1‐boronic acid. The as‐prepared BC10 showed greenish‐white luminescence under 365 nm UV illumination with quantum yield (QY) of 5.5 % at optimum dilution with dimethyl sulfur oxide (DMSO) solvent. The BC10 in DMSO (DS‐BC10) have shown high selectivity and sensitivity towards Mg2+ ion through the increased PL intensity due to chelation‐enhanced photoluminescence (CHEP). The enhanced PL intensity was further supported by the increased QY by a factor of 12 after the addition of Mg2+ ions to 65 …

The nanoscale structure of equimolar binary mixtures [C 12 mim] 0.5 [C n mim] 0.5 [NTf 2] was studied by small-angle X-ray scattering for n= 1-22 and T= 293-373 K. All mixtures exhibit local layering and layer-normal thermal contraction with increasing T, as found for the pure components. The layer-parallel spacings of the polar headgroups and of the alkyl chains vary minimally with n over the full n range. The layer-normal spacing d I at high n follows closely, with a 1–1.5 Å downshift, the increasing trend of the pure longer component’s d I, indicating its dominance of the layering. At low n, d I at n= 1 greatly exceeds d I of the pure longer component, n= 12, and decreases sharply with increasing n, indicating a structure akin to lipid bilayer solutions. At intermediate n, d I is roughly constant, lying 1–1.5 Å below d I of n= 12. Our layer spacings provide a near-unique opportunity to study the evolution over a wide n-range …

Doped Mott insulators exhibit some of the most intriguing quantum phases of matter, including quantum spin-liquids, unconventional superconductors, and non-Fermi liquid metals. Such phases often arise when itinerant electrons are close to a Mott insulating state, and thus experience strong spatial correlations. Proximity between different layers of van der Waals heterostructures naturally realizes a platform for experimentally studying the relationship between localized, correlated electrons and itinerant electrons. Here, we explore this relationship by studying the magnetic landscape of 4Hb-TaS2, which realizes an alternate stack of a candidate spin liquid and a superconductor. We report on a spontaneous vortex phase whose vortex density can be trained in the normal state. We show that time reversal symmetry is broken above Tc, indicating the presence of a magnetic phase independent of the superconductor. Strikingly, this phase does not generate detectable magnetic signals. We use scanning superconducting quantum interference device (SQUID) microscopy to show that it is incompatible with ferromagnetic ordering. The discovery of this new form of hidden magnetism illustrates how combining superconductivity with a strongly correlated system can lead to new, unexpected physics.

Uncertainty relations play a crucial role in quantum mechanics. A well-defined method exists for deriving such uncertainties for pairs of observables. It does not include, however, an important family of fundamental relations: the time-energy uncertainty relations. As a result, different approaches have been used for obtaining them in diversified scenarios. The one of interest here revolves around the idea of the existence or inexistence of a minimum duration for an energy measurement with a certain precision. In our study, we use the Page and Wooters timeless framework to investigate how energy measurements modify the relative "flow of time" between internal and external clocks. This provides a unified framework for discussing the topic, recovering previous results and leading to new ones. We also show that the evolution of the external clock with respect to the internal one is non-unitary.

We present a novel method that we call FAINE, fast artificial intelligence neutron detection system. FAINE automatically classifies tracks of fast neutrons on CR-39 detectors using a deep learning model. This method was demonstrated using a LANDAUER Neutrak® fast neutron dosimetry system, which is installed in the External Dosimetry Laboratory (EDL) at Soreq Nuclear Research Center (SNRC). In modern fast neutron dosimetry systems, after the preliminary stages of etching and imaging of the CR-39 detectors, the third stage uses various types of computer vision systems combined with a manual revision to count the CR-39 tracks and then convert them to a dose in mSv units. Our method enhances these modern systems by introducing an innovative algorithm, which uses deep learning to classify all CR-39 tracks as either real neutron tracks or any other sign such as dirt, scratches, or even cleaning remainders. This new algorithm makes the third stage of manual CR-39 tracks revision superfluous and provides a completely repeatable and accurate way of measuring either neutrons flux or dose. The experimental results show a total accuracy rate of 96.7% for the true positive tracks and true negative tracks detected by our new algorithm against the current method, which uses computer vision followed by manual revision. This algorithm is now in the process of calibration for both alpha-particles detection and fast neutron spectrometry classification and is expected to be very useful in analyzing results of proton-boron11 fusion experiments. Being fully automatic, the new algorithm will enhance the quality assurance and effectiveness of …

SOX genesare master regulatory genes controlling development and are fundamental to the establishment of sex determination in a multitude of organisms. The discovery of the master sex-determining gene SRY in 1990 was pivotal for the understanding of how testis development is initiated in mammals. With this discovery, an entire family of SOX factors were uncovered that play crucial roles in cell fate decisions during development. The importance of SOX genes in human reproductive development is evident from the various disorders of sex development (DSD) upon loss or overexpression of SOX gene function. Here, we review the roles that SOX genes play in gonad development and their involvement in DSD. We start with an overview of sex determination and differentiation, DSDs, and the SOX gene family and function. We then provide detailed information and discussion on SOX genes that have been …

In early disease stages, biomolecules of interest exist in very low concentrations, presenting a significant challenge for analytical devices and methods. Here, we provide a comprehensive overview of an innovative optical biosensing technology, termed magnetic modulation biosensing (MMB), its biomedical applications, and its ongoing development. In MMB, magnetic beads are attached to fluorescently labeled target molecules. A controlled magnetic force aggregates the magnetic beads and transports them in and out of an excitation laser beam, generating a periodic fluorescent signal that is detected and demodulated. MMB applications include rapid and highly sensitive detection of specific nucleic acid sequences, antibodies, proteins, and protein interactions. Compared with other established analytical methodologies, MMB provides improved sensitivity, shorter processing time, and simpler protocols.