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Mar 2023 • Proc. of SPIE Vol

Dynamics and Fluctuations in Biomedical Photonics XX

Valery V Tuchin, Martin J Leahy, Ruikang K Wang, Zeev Zalevsky

PROCEEDINGS OF SPIE Page 1 PROCEEDINGS OF SPIE SPIEDigitalLibrary.org/conference-proceedings-of-spie Front Matter: Volume 12378 , "Front Matter: Volume 12378," Proc. SPIE 12378, Dynamics and Fluctuations in Biomedical Photonics XX, 1237801 (31 March 2023); doi: 10.1117/12.2676834 Event: SPIE BiOS, 2023, San Francisco, California, United States Downloaded From: https://www.spiedigitallibrary.org/conference-proceedings-of-spie on 07 Apr 2023 Terms of Use: https://www.spiedigitallibrary.org/terms-of-use Page 2 PROGRESS IN BIOMEDICAL OPTICS AND IMAGING Vol. 24 No. 27 Volume 12378 Proceedings of SPIE, 1605-7422, V. 12378 SPIE is an international society advancing an interdisciplinary approach to the science and application of light. Dynamics and Fluctuations in Biomedical Photonics XX Valery V. Tuchin Martin J. Leahy Ruikang K. Wang Zeev Zalevsky Editors 29–30 January …

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Mar 2023 • Journal of Hazardous Materials

Soil adsorption and transport of lead in the presence of perovskite solar cell-derived organic cations

Arindam Mallick, Rene D Mendez Lopez, Gilboa Arye, David Cahen, Iris Visoly-Fisher

Perovskite photovoltaics offer a highly efficient and low-cost solar energy harvesting technology. However, the presence of lead (Pb) cations in photovoltaic halide perovskite (HaPs) materials is concerning, and quantifying the environmental hazard of accidental Pb2+ leaching into the soil is crucial for assessing the sustainability of this technology. Pb2+ from inorganic salts was previously found to remain in the upper soil layers due to adsorption. However, Pb-HaPs contain additional organic and inorganic cations, and competitive cation adsorption may affect Pb2+ retention in soils. Therefore, we measured, analyzed by simulations and report the depths to which Pb2+ from HaPs penetrates into 3 types of agricultural soil. Most of the HaP-leached Pb2+ is found to be retained already in the first cm of the soil columns, and subsequent rain events do not induce Pb2+ penetration below the first few cm of soil surface …

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Mar 2023 • 2023 Optical Fiber Communications Conference and Exhibition (OFC), 1-3, 2023

Incoherent Fiber-based Optical Neuromorphic Computing Circuit

Maya Yevnin, Alon Harel, Or Arbel-Arenfrid, Zeev Zalevsky, Eyal Cohen

We present novel photonic neuromorphic computing scheme working with incoherent light while capable implementing negative weighting for the neural network and obtaining reliable/accurate computing of the linear multiply-accumulate function necessary for neural networks applications.

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Feb 2023 • Cold Spring Harbor Protocols

Single-pair courtship and competition assays in Drosophila

Anne C von Philipsborn, Galit Shohat-Ophir, Carolina Rezaval

Courtship in Drosophila melanogaster involves a series of innate, complex behaviors that allow male and female flies to exchange sensory information and assess the quality of a potential mate. Although highly robust and stereotypical, courtship behaviors can be modulated by internal state and experience. This protocol describes methods for designing and carrying out experiments that measure courtship performance in single-pair assays, in which a male is paired with a female, or in competitive assays, in which a male is presented with a female and with a male competitor. It also includes approaches for measuring female sexual receptivity during courtship.

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Feb 2023 • Cold Spring Harbor Protocols

Measurement of Drosophila Reproductive Behaviors

Anne C von Philipsborn, Galit Shohat-Ophir, Carolina Rezaval

Courtship behaviors in Drosophila melanogaster are innate and contain highly stereotyped but also experience-and state-dependent elements. They have been the subject of intense study for more than 100 years. The power of Drosophila as a genetic experimental system has allowed the dissection of reproductive behaviors at a molecular, cellular, and physiological level. As a result, we know a great deal about how flies perceive sensory cues from potential mates, how this information is integrated in higher brain centers to execute reproductive decisions, and how state and social contexts modulate these responses. The simplicity of the assay has allowed for its broad application. Here, we introduce methods for studying male and female innate reproductive behaviors as well as their plastic responses.

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Feb 2023 • Cold Spring Harbor Protocols

Female fly postmating behaviors

Anne C von Philipsborn, Galit Shohat-Ophir, Carolina Rezaval

Upon copulation, females undergo a switch-like change in their behavior and physiology, known as “postmating responses.” These strong behavioral and physiological changes are triggered by the transfer of male seminal proteins during copulation. Postmating response is associated with strong reduction in receptivity, indicated by the females kicking their legs toward the suitor and curving their abdomen downward to hide their genitalia from them and extruding their ovipositor at the tip of the abdomen, which physically prevents copulation. The transfer of male-specific pheromones, such as 11-cis-vaccenyl-acetate, during copulation further reduces female attractiveness. In addition, mated females exhibit increased ovulation, egg-laying behavior, enhanced feeding behavior, and changes in food preference. However, females increase their rate of remating when they are in social groups or in the presence of food …

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Feb 2023 • Physical Review Research

Countering a fundamental law of attraction with quantum wave-packet engineering

Gal Amit, Yonathan Japha, Tomer Shushi, Ron Folman, Eliahu Cohen

Cold atoms hold much promise for the realization of quantum technologies, but still encounter many challenges. In this work we show how the fundamental Casimir-Polder force, by which atoms are attracted to a surface, may be temporarily suppressed by utilizing a specially designed quantum potential, which is familiar from the hydrodynamic or Bohmian reformulations of quantum mechanics. We show that when harnessing the quantum potential via suitable atomic wave-packet engineering, the absorption by the surface can be dramatically reduced. As a result, the probing time of the atoms as sensors can increase. This is proven both analytically and numerically. Furthermore, an experimental scheme is proposed for achieving the required shape for the atomic wave packet. All these may assist existing applications of cold atoms in metrology and sensing and may also enable prospective ones. Finally, these …

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Feb 2023 • Cold Spring Harbor Protocols

Probing acoustic communication during fly reproductive behaviors

Anne C von Philipsborn, Galit Shohat-Ophir, Carolina Rezaval

During reproduction, male and female flies use wing vibration to generate different acoustic signals. Males produce a courtship song before copulation that is easily recognized by unilateral wing vibration. In copula, females produce a distinct sound pattern (copulation song) with both wings. Sexual rejection of immature virgins and aggressive encounters between males are also accompanied by sound pulses generated by wing flicks. Fly song has frequency ranges audible to the human ear and can be directly listened to after appropriate amplification. When displayed in an oscillogram, audio recordings can be mapped on wing-movement patterns and thus provide a fast and precise method to sample and quantify motor behaviors with high temporal resolution. After recording different fly sounds, their effect on behavior can be tested in playback experiments.

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Feb 2023 • Angewandte Chemie (International ed. in English)

Peptide Bond Formation in the Protonated Serine Dimer Following Vacuum UV Photon‐Induced Excitation

Ori Licht, Dario Barreiro-Lage, Patrick Rousseau, Alexandre Giuliani, Aleksandar Milosavljevic, Avinoam Isaak, Yitzhak Mastai, Amnon Albeck, Raj Singh, Vy Nguyen, Laurent Nahon, Lara Martinez, Sergio Díaz-Tendero, Yoni Toker

Possible routes for intra-cluster bond formation (ICBF) in protonated serine dimers have been studied. We found no evidence of ICBF following low energy collision induced dissociation (in correspondence with previous works), however, we do observe clear evidence for ICBF following photon absorption in the eV range. Moreover, the comparison of photon induced dissociation measurements of the protonated serine dimer to those of a protonated serine dipeptide provides evidence that ICBF, in this case, involves peptide bond formation (PBF). The experimental results are supported by {\it ab initio} molecular dynamics and exploration of several excited state potential energy surfaces, unravelling a pathway for PBF following photon absorption. The combination of experiments and theory provides insight into the PBF mechanisms in clusters of amino acids, and reveals the importance of electronic excited states reached upon UV/VUV light excitation.

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Feb 2023 • IEEE Transactions on Applied Superconductivity

Effect of magnetic fields on superconducting microwave coplanar resonators

A Roitman, A Shaulov, Y Yeshurun

Coplanar microwave resonators made of NbN and YBa 2 Cu 3 O 7-δ show similar behavior under the influence of magnetic field. In particular, the two resonators exhibit marked difference between zero-field-cooled (ZFC) and field-cooled (FC) measurements, which is attributed to the presence of screening currents in ZFC but not in FC measurements.

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Feb 2023 • Pharmaceutics 15 (2), 686, 2023

Bioimaging Probes Based on Magneto-Fluorescent Nanoparticles

Sayan Ganguly, Shlomo Margel

Novel nanomaterials are of interest in biology, medicine, and imaging applications. Multimodal fluorescent-magnetic nanoparticles demand special attention because they have the potential to be employed as diagnostic and medication-delivery tools, which, in turn, might make it easier to diagnose and treat cancer, as well as a wide variety of other disorders. The most recent advancements in the development of magneto-fluorescent nanocomposites and their applications in the biomedical field are the primary focus of this review. We describe the most current developments in synthetic methodologies and methods for the fabrication of magneto-fluorescent nanocomposites. The primary applications of multimodal magneto-fluorescent nanoparticles in biomedicine, including biological imaging, cancer treatment, and drug administration, are covered in this article, and an overview of the future possibilities for these technologies is provided.

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Feb 2023 • Cold Spring Harbor Protocols

Courtship conditioning/suppression assays in Drosophila

Anne C von Philipsborn, Galit Shohat-Ophir, Carolina Rezaval

Naive males court both virgin and mated females but learn through experience to discriminate between them, thus minimizing futile investments in nonreceptive female flies. In the laboratory, we can exploit the innate courtship enthusiasm of males and manipulate their behavior by placing them with a nonreceptive female (immature virgin females, decapitated mature virgin females, or mature mated females), termed as the courtship suppression/conditioning assay. Early studies showed that male flies that experience failure to mate upon interaction with nonreceptive previously mated females show decreased motivation to court (courtship suppression). Courtship suppression is an important experimental paradigm for studying genes and neuronal circuits that mediate short-and long-term memory. The anti-aphrodisiac male-specific pheromone 11-cis-vaccenyl-acetate plays a key role in this conditioned response, as …

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Feb 2023 • arXiv preprint arXiv:2302.00726

Quantum Engines and Refrigerators

Loris Maria Cangemi, Chitrak Bhadra, Amikam Levy

Engines are systems and devices that convert one form of energy into another, typically into a more useful form that can perform work. In the classical setup, physical, chemical, and biological engines largely involve the conversion of heat into work. This energy conversion is at the core of thermodynamic laws and principles and is codified in textbook material. In the quantum regime, however, the principles of energy conversion become ambiguous, since quantum phenomena come into play. As with classical thermodynamics, fundamental principles can be explored through engines and refrigerators, but, in the quantum case, these devices are miniaturized and their operations involve uniquely quantum effects. Our work provides a broad overview of this active field of quantum engines and refrigerators, reviewing the latest theoretical proposals and experimental realizations. We cover myriad aspects of these devices, starting with the basic concepts of quantum analogs to the classical thermodynamic cycle and continuing with different quantum features of energy conversion that span many branches of quantum mechanics. These features include quantum fluctuations that become dominant in the microscale, non-thermal resources that fuel the engines, and the possibility of scaling up the working medium's size, to account for collective phenomena in many-body heat engines. Furthermore, we review studies of quantum engines operating in the strong system-bath coupling regime and those that include non-Markovian phenomena. Recent advances in thermoelectric devices and quantum information perspectives, including quantum measurement …

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Feb 2023 • Batteries 9 (2), 110, 2023

Recent Progress in Solid Electrolytes for All-Solid-State Metal (Li/Na)–Sulfur Batteries

Ravindra Kumar Bhardwaj, David Zitoun

Background:This is an early access version, the complete PDF, HTML, and XML versions will be available soon.

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Feb 2023 • Nano-Structures & Nano-Objects

Nano-apertures vs. nano-barriers: Surface scanning through obstacles and super-resolution in AFM-NSOM dual-mode

Jérémy Belhassen, David Glukhov, Matityahu Karelits, Zeev Zalevsky, Avi Karsenty

As part of the performance characterization of a combined and enhanced new AFM-NSOM tip-photo-detector, diffraction limitations were studied on two complementary samples: a nano-barrier embedded between two nano-apertures and one nano-aperture embedded between two nano-barriers. These consecutive multiple-obstacle scanning paths are part of this challenging specifications study of a new conical-shaped and drilled tip-photodetector, sharing a subwavelength aperture. A super-resolution algorithm feature was added in order to overcome possible obstacles, while scanning the same object with several small angles. The new multi-mode system includes scanning topography, optical imaging and an obstacle-overcoming algorithm. The present article study emphasizes the complexity of nano-scanning multiple-apertures/barriers. Both complementary analytical (Python) and numerical (Comsol …

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Feb 2023 • Nanomaterials 13 (3), 598, 2023

Recent advances in the spintronic application of carbon-based nanomaterials

Shweta Pawar, Hamootal Duadi, Dror Fixler

The term “carbon-based spintronics” mostly refers to the spin applications in carbon materials such as graphene, fullerene, carbon nitride, and carbon nanotubes. Carbon-based spintronics and their devices have undergone extraordinary development recently. The causes of spin relaxation and the characteristics of spin transport in carbon materials, namely for graphene and carbon nanotubes, have been the subject of several theoretical and experimental studies. This article gives a summary of the present state of research and technological advancements for spintronic applications in carbon-based materials. We discuss the benefits and challenges of several spin-enabled, carbon-based applications. The advantages include the fact that they are significantly less volatile than charge-based electronics. The challenge is in being able to scale up to mass production.

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Feb 2023 • International Journal of Molecular Sciences

Characterization of Continuous Transcriptional Heterogeneity in High-Risk Blastemal-Type Wilms’ Tumors Using Unsupervised Machine Learning

Yaron Trink, Achia Urbach, Benjamin Dekel, Peter Hohenstein, Jacob Goldberger, Tomer Kalisky

Wilms’ tumors are pediatric malignancies that are thought to arise from faulty kidney development. They contain a wide range of poorly differentiated cell states resembling various distorted developmental stages of the fetal kidney, and as a result, differ between patients in a continuous manner that is not well understood. Here, we used three computational approaches to characterize this continuous heterogeneity in high-risk blastemal-type Wilms’ tumors. Using Pareto task inference, we show that the tumors form a triangle-shaped continuum in latent space that is bounded by three tumor archetypes with “stromal”, “blastemal”, and “epithelial” characteristics, which resemble the un-induced mesenchyme, the cap mesenchyme, and early epithelial structures of the fetal kidney. By fitting a generative probabilistic “grade of membership” model, we show that each tumor can be represented as a unique mixture of three hidden “topics” with blastemal, stromal, and epithelial characteristics. Likewise, cellular deconvolution allows us to represent each tumor in the continuum as a unique combination of fetal kidney-like cell states. These results highlight the relationship between Wilms’ tumors and kidney development, and we anticipate that they will pave the way for more quantitative strategies for tumor stratification and classification.

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Feb 2023 • Nanophotonics

Digital laser-induced printing of MoS2

Adamantia Logotheti, Adi Levi, Doron Naveh, Leonidas Tsetseris, Ioanna Zergioti

Due to their atomic-scale thickness, handling and processing of two-dimensional (2D) materials often require multistep techniques whose complexity hampers their large-scale integration in modern device applications. Here we demonstrate that the laser-induced forward transfer (LIFT) method can achieve the one-step, nondestructive printing of the prototypical 2D material MoS2. By selecting the optimal LIFT experimental conditions, we were able to transfer arrays of MoS2 pixels from a metal donor substrate to a dielectric receiver substrate. A combination of various characterization techniques has confirmed that the transfer of intact MoS2 monolayers is not only feasible, but it can also happen without incurring significant defect damage during the process. The successful transfer of MoS2 shows the broad potential the LIFT technique has in the emerging field of printed electronics, including printed devices based …

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Feb 2023 • Nature Communications

Phonon-driven intra-exciton Rabi oscillations in CsPbBr3 halide perovskites

Xuan Trung Nguyen, Katrin Winte, Daniel Timmer, Yevgeny Rakita, Davide Raffaele Ceratti, Sigalit Aharon, Muhammad Sufyan Ramzan, Caterina Cocchi, Michael Lorke, Frank Jahnke, David Cahen, Christoph Lienau, Antonietta De Sio

Coupling electromagnetic radiation with matter, e.g., by resonant light fields in external optical cavities, is highly promising for tailoring the optoelectronic properties of functional materials on the nanoscale. Here, we demonstrate that even internal fields induced by coherent lattice motions can be used to control the transient excitonic optical response in CsPbBr3 halide perovskite crystals. Upon resonant photoexcitation, two-dimensional electronic spectroscopy reveals an excitonic peak structure oscillating persistently with a 100-fs period for up to ~2 ps which does not match the frequency of any phonon modes of the crystals. Only at later times, beyond 2 ps, two low-frequency phonons of the lead-bromide lattice dominate the dynamics. We rationalize these findings by an unusual exciton-phonon coupling inducing off-resonant 100-fs Rabi oscillations between 1s and 2p excitons driven by the low-frequency …

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Feb 2023 • Physical Review Research

Countering a fundamental law of attraction with quantum wave-packet engineering

Gal Amit, Yonathan Japha, Tomer Shushi, Ron Folman, Eliahu Cohen

Cold atoms hold much promise for the realization of quantum technologies, but still encounter many challenges. In this work we show how the fundamental Casimir-Polder force, by which atoms are attracted to a surface, may be temporarily suppressed by utilizing a specially designed quantum potential, which is familiar from the hydrodynamic or Bohmian reformulations of quantum mechanics. We show that when harnessing the quantum potential via suitable atomic wave-packet engineering, the absorption by the surface can be dramatically reduced. As a result, the probing time of the atoms as sensors can increase. This is proven both analytically and numerically. Furthermore, an experimental scheme is proposed for achieving the required shape for the atomic wave packet. All these may assist existing applications of cold atoms in metrology and sensing and may also enable prospective ones. Finally, these …

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Feb 2023 • Physical Review A

Tracking nanoscale perturbation in active disordered media

Renu Yadav, Patrick Sebbah, Maruthi M Brundavanam

Disorder-induced feedback makes random lasers very susceptible to any changes in the scattering medium. The sensitivity of the lasing modes to perturbations in the disordered systems has been utilized to map the regions of perturbation. A tracking parameter that takes into account the cumulative effect of changes in the spatial distribution of the lasing modes of the system has been defined to locate the region in which a scatterer is displaced by a few nanometers. We show numerically that the precision of the method increases with the number of modes. The proposed method opens up the possibility of application of random lasers as a tool for monitoring locations of nanoscale displacement, which can be useful for single-particle detection and monitoring.

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