Jan 2024 • Proc. of SPIE Vol
Dror Fixler, Sebastian Wachsmann-Hogiu
Nanoscale Imaging, Sensing, and Actuation for Biomedical Applications XXI Page 1 PROGRESS IN BIOMEDICAL OPTICS AND IMAGING Vol. 25 No. 43 Volume 12858 Proceedings of SPIE, 1605-7422, V. 12858 SPIE is an international society advancing an interdisciplinary approach to the science and application of light. Nanoscale Imaging, Sensing, and Actuation for Biomedical Applications XXI Dror Fixler Sebastian Wachsmann-Hogiu Editors 28 January 2024 San Francisco, California, United States Sponsored by SPIE Cosponsored by Prizmatix Ltd. (Israel) Published by SPIE Nanoscale Imaging, Sensing, and Actuation for Biomedical Applications XXI, edited by Dror Fixler, Sebastian Wachsmann-Hogiu, Proc. of SPIE Vol. 12858, 1285801 © 2024 SPIE · 1605-7422 · doi: 10.1117/12.3030104 Proc. of SPIE Vol. 12858 1285801-1 Page 2 The papers in this volume were part of the technical conference cited on the …
Show moreJan 2024 • Molecules
Adam Soffer, Samuel Joshua Viswas, Shahar Alon, Nofar Rozenberg, Amit Peled, Daniel Piro, Dan Vilenchik, Barak Akabayov
MolOptimizer is a user-friendly computational toolkit designed to streamline the hit-to-lead optimization process in drug discovery. MolOptimizer extracts features and trains machine learning models using a user-provided, labeled, and small-molecule dataset to accurately predict the binding values of new small molecules that share similar scaffolds with the target in focus. Hosted on the Azure web-based server, MolOptimizer emerges as a vital resource, accelerating the discovery and development of novel drug candidates with improved binding properties.
Show moreJan 2024 • Journal of Colloid and Interface Science
Diego Pontoni, Marco DiMichiel, Bridget M Murphy, Veijo Honkimäki, Moshe Deutsch
Abstract Hypothesis Room Temperature Ionic Liquids (RTILs) bulk's molecular layering dominates their structure also at the RTIL/sapphire interface, increasing the layer spacing with the cationic alkyl chain length n. However, the negatively-charged sapphire surface compresses the layers, increases the layering range, and affects the intra-layer structure in yet unknown ways. Experiments X-ray reflectivity (XR) off the RTIL/sapphire interface, for a broad homologous RTIL series 1-alkyl-3-methylimidazolium bis (trifluoromethansulfonyl) imide, hitherto unavailable for any RTIL. Findings RTIL layers against the sapphire, exhibit two spacings: d a and d b. d a is n-varying, follows the behavior of the bulk spacing but exhibits a downshift, thus showing significant layer compression, and over twofold polar slab thinning. The latter suggests exclusion of anions from the interfacial region due to the negative sapphire charging …
Show moreJan 2024 • Journal of Vacuum Science & Technology B
Nathalie Lander Gower, Shiran Levy, Silvia Piperno, Sadhvikas J Addamane, John L Reno, Asaf Albo
We hereby offer a comprehensive analysis of various factors that could potentially enable terahertz quantum cascade lasers (THz QCLs) to achieve room temperature performance. We thoroughly examine and integrate the latest findings from recent studies in the field. Our work goes beyond a mere analysis; it represents a nuanced and comprehensive exploration of the intricate factors influencing the performance of THz QCLs. Through a comprehensive and holistic approach, we propose novel insights that significantly contribute to advancing strategies for improving the temperature performance of THz QCLs. This all-encompassing perspective allows us not only to present a synthesis of existing knowledge but also to offer a fresh and nuanced strategy to improve the temperature performance of THz QCLs. We draw new conclusions from prior works, demonstrating that the key to enhancing THz QCL temperature …
Show moreJan 2024 • ACS nano
Leonardo Ricotti, Andrea Cafarelli, Cristina Manferdini, Diego Trucco, Lorenzo Vannozzi, Elena Gabusi, Francesco Fontana, Paolo Dolzani, Yasmin Saleh, Enrico Lenzi, Marta Columbaro, Manuela Piazzi, Jessika Bertacchini, Andrea Aliperta, Markys Cain, Mauro Gemmi, Paola Parlanti, Carsten Jost, Yirij Fedutik, Gilbert Daniel Nessim, Madina Telkhozhayeva, Eti Teblum, Erik Dumont, Chiara Delbaldo, Giorgia Codispoti, Lucia Martini, Matilde Tschon, Milena Fini, Gina Lisignoli
The use of piezoelectric nanomaterials combined with ultrasound stimulation is emerging as a promising approach for wirelessly triggering the regeneration of different tissue types. However, it has never been explored for boosting chondrogenesis. Furthermore, the ultrasound stimulation parameters used are often not adequately controlled. In this study, we show that adipose-tissue-derived mesenchymal stromal cells embedded in a nanocomposite hydrogel containing piezoelectric barium titanate nanoparticles and graphene oxide nanoflakes and stimulated with ultrasound waves with precisely controlled parameters (1 MHz and 250 mW/cm2, for 5 min once every 2 days for 10 days) dramatically boost chondrogenic cell commitment in vitro. Moreover, fibrotic and catabolic factors are strongly down-modulated: proteomic analyses reveal that such stimulation influences biological processes involved in cytoskeleton …
Show moreJan 2024 • ACS Infectious Diseases 10 (2), 287-316, 2024
Sukanya Patra, Divya Pareek, Prem Shankar Gupta, Kirti Wasnik, Gurmeet Singh, Desh Deepak Yadav, Yitzhak Mastai, Pradip Paik
In this era of advanced technology and innovation, infectious diseases still cause significant morbidity and mortality, which need to be addressed. Despite overwhelming success in the development of vaccines, transmittable diseases such as tuberculosis and AIDS remain unprotected, and the treatment is challenging due to frequent mutations of the pathogens. Formulations of new or existing drugs with polymeric materials have been explored as a promising new approach. Variations in shape, size, surface charge, internal morphology, and functionalization position polymer particles as a revolutionary material in healthcare. Here, an overview is provided of major diseases along with statistics on infection and death rates, focusing on polymer-based treatments and modes of action. Key issues are discussed in this review pertaining to current challenges and future perspectives.
Show moreJan 2024 • Neuro-oncology advances 6 (1), vdae030, 2024
Christopher P Millward, Sumirat M Keshwara, Terri S Armstrong, Heather Barrington, Sabrina Bell, Andrew R Brodbelt, Helen Bulbeck, Linda Dirven, Paul L Grundy, Abdurrahman I Islim, Mohsen Javadpour, Shelli D Koszdin, Anthony G Marson, Michael W McDermott, Torstein R Meling, Kathy Oliver, Puneet Plaha, Matthias Preusser, Thomas Santarius, Nisaharan Srikandarajah, Martin JB Taphoorn, Carole Turner, Colin Watts, Michael Weller, Paula R Williamson, Gelareh Zadeh, Amir H Zamanipoor Najafabadi, Michael D Jenkinson
Background Meningioma clinical trials have assessed interventions including surgery, radiotherapy, and pharmacotherapy. However, agreement does not exist on what, how, and when outcomes of interest should be measured. To do so would allow comparative analysis of similar trials. This systematic review aimed to summarize the outcomes measured and reported in meningioma clinical trials. Methods Systematic literature and trial registry searches were performed to identify published and ongoing intracranial meningioma clinical trials (PubMed, Embase, Medline, CINAHL via EBSCO, and Web of Science, completed January 22, 2022). Reported outcomes were extracted verbatim, along with an associated definition and method of measurement if provided. Verbatim outcomes were deduplicated and the resulting unique outcomes were grouped under standardized …
Show moreJan 2024 • Journal of Physics: Materials
Dennis Valbjørn Christensen, Urs Staub, TR Devidas, Beena Kalisky, Katja Nowack, James Luke Webb, Ulrik L Andersen, Alexander Huck, David Aaron Broadway, Kai Wagner, Patrick Maletinsky, Toeno van der Sar, Chunhui Du, Amir Yacoby, David Collomb, Simon J Bending, Ahmet Oral, Hans Josef Hug, Andrada Oana Mandru, Volker Neu, Hans Werner Schumacher, Sibylle Sievers, Hitoshi Saito, Alexander Ako Khajetoorians, Nadine Hauptmann, Susanne Baumann, Alexander Eichler, Christian Degen, Jeffrey McCord, Michael Vogel, Manfred Fiebig, Peter Fischer, Aurelio Hierro-Rodriguez, Simone Finizio, Sarnjeet Dhesi, Claire Donnelly, Felix Buttner, Ofer Kfir, Wen Hu, Sergey Zayko, Stefan Eisebitt, Bastian Pfau, Robert Frömter, Mathias Kläui, Fehmi Yasin, Benjamin J McMorran, Shinichiro Seki, Xiuzhen Yu, Axel Lubk, Daniel Wolf, Nini Pryds, Denys Makarov, Martino Poggio
Considering the growing interest in magnetic materials for unconventional computing, data storage, and sensor applications, there is active research not only on material synthesis but also characterisation of their properties. In addition to structural and integral magnetic characterisations, imaging of magnetization patterns, current distributions and magnetic fields at nano- and microscale is of major importance to understand the material responses and qualify them for specific applications. In this roadmap, we aim to cover a broad portfolio of techniques to perform nano- and microscale magnetic imaging using SQUIDs, spin center and Hall effect magnetometries, scanning probe microscopies, x-ray- and electron-based methods as well as magnetooptics and nanoMRI. The roadmap is aimed as a single access point of information for experts in the field as well as the young generation of students outlining prospects of …
Show moreJan 2024 • ACS Applied Bio Materials
Ilana Perelshtein, Sivan Shoshani, Gila Jacobi, Michal Natan, Nataliia Dudchenko, Nina Perkas, Maria Tkachev, Rossella Bengalli, Luisa Fiandra, Paride Mantecca, Kristina Ivanova, Tzanko Tzanov, Ehud Banin, Aharon Gedanken
Catheter-associated urinary tract infections (CAUTI) are among the most common bacterial infections associated with prolonged hospitalization and increased healthcare expenditures. Despite recent advances in the prevention and treatment of these infections, there are still many challenges remaining, among them the creation of a durable catheter coating, which prevents bacterial biofilm formation. The current work reports on a method of protecting medical tubing endowed with antibiofilm properties. Silicone catheters coated sonochemically with ZnO nanoparticles (NPs) demonstrated excellent antibiofilm effects. Toward approval by the European Medicines Agency, it was realized that the ZnO coating would not withstand the regulatory requirements of avoiding dissolution for 14 days in artificial urine examination. Namely, after exposure to urine for 14 days, the coating amount was reduced by 90%. Additional …
Show moreJan 2024 • Sensors
Daniel Lahav, Moty Schultz, Shai Amrusi, Asaf Grosz, Lior Klein
The magnetic field range in which a magnetic sensor operates is an important consideration for many applications. Elliptical planar Hall effect (EPHE) sensors exhibit outstanding equivalent magnetic noise (EMN) on the order of pT/
Show moreJan 2024 • Physical Review Letters
Y Wu, A Roy, S Dutta, J Jesudasan, P Raychaudhuri, A Frydman
The hexatic phase is an intermediate stage in the melting process of a 2D crystal due to topological defects. Recently, this exotic phase was experimentally identified in the vortex lattice of 2D weakly disordered superconducting MoGe by scanning tunneling microscopic measurements. Here, we study this vortex state by the Nernst effect, which is an effective and sensitive tool to detect vortex motion, especially in the superconducting fluctuation regime. We find a surprising Nernst sign reversal at the melting transition of the hexatic phase. We propose that they are a consequence of vortex dislocations in the hexatic state which diffuse preferably from the cold to hot.
Show moreJan 2024 • Journal of Physics A: Mathematical and Theoretical
Wanli Wang, Eli Barkai
The non-Markovian continuous-time random walk model, featuring fat-tailed waiting times and narrow distributed displacements with a non-zero mean, is a well studied model for anomalous diffusion. Using an analytical approach, we recently demonstrated how a fractional space advection diffusion asymmetry equation, usually associated with Markovian Lévy flights, describes the spreading of a packet of particles. Since we use Gaussian statistics for jump lengths though fat-tailed distribution of waiting times, the appearance of fractional space derivatives in the kinetic equation demands explanations provided in this manuscript. As applications we analyse the spreading of tracers in two dimensions, breakthrough curves investigated in the field of contamination spreading in hydrology and first passage time statistics. We present a subordination scheme valid for the case when the mean waiting time is finite and the …
Show moreJan 2024 • Physical Review A
Itamar Stern, Yakov Bloch, Einav Grynszpan, Merav Kahn, Yakir Aharonov, Justin Dressel, Eliahu Cohen, John C Howell
Superoscillatory, band-limited functions oscillate faster than their fastest Fourier component. Superoscillations have been intensively explored recently as they give rise to many out-of-the-spectrum phenomena entailing both fundamental and applied significance. We experimentally demonstrate a form of superoscillations which is manifested by light apparently coming from a source located far away from the actual one. These superoscillations are sensed through sharp transverse shifts in the local wave vector at the minima of a pinhole diffraction pattern. We call this phenomenon “optical ventriloquism.”
Show moreJan 2024 • The Journal of Physical Chemistry Letters
Nagaprasad Reddy Samala, Ariel Friedman, Lior Elbaz, Ilya Grinberg
The development of durable platinum-group-metal-free oxygen reduction reaction (ORR) catalysts is a key research direction for enabling the wide use of fuel cells. Here, we use a combination of experimental measurements and density functional theory calculations to study the activity and durability of seven iron-based metallophthalocyanine (MPc) ORR catalysts that differ only in the identity of the substituent groups on the MPcs. While the MPcs show similar ORR activity, their durabilities as measured by the current decay half-life differ greatly. We find that the energy difference between the hydrogenated intermediate structure and the final demetalated structure (ΔEdemetalation) of the MPcs is linearly related to the degradation reaction barrier energy. Comparison to the degradation data for the previously studied metallocorrole systems suggested that ΔEdemetalation also serves as a descriptor for the corrole …
Show moreJan 2024 • Cells
Basel Obied, Stephen Richard, Alon Zahavi, Dror Fixler, Olga Girshevitz, Nitza Goldenberg-Cohen
Cobalt toxicity is difficult to detect and therefore often underdiagnosed. The aim of this study was to explore the pathophysiology of cobalt-induced oxidative stress in the brain and its impact on structure and function. Thirty-five wild-type C57B16 mice received intraperitoneal cobalt chloride injections: a single high dose with evaluations at 24, 48, and 72 h (n= 5, each) or daily low doses for 28 (n= 5) or 56 days (n= 15). A part of the 56-day group also received minocycline (n= 5), while 10 mice served as controls. Behavioral changes were evaluated, and cobalt levels in tissues were measured with particle-induced X-ray emission. Brain sections underwent magnetic resonance imaging (MRI), electron microscopy, and histological, immunohistochemical, and molecular analyses. High-dose cobalt caused transient illness, whereas chronic daily low-dose administration led to long-term elevations in cobalt levels …
Show moreJan 2024 • ACS Infectious Diseases 10 (2), 287-316, 2024
Sukanya Patra, Divya Pareek, Prem Shankar Gupta, Kirti Wasnik, Gurmeet Singh, Desh Deepak Yadav, Yitzhak Mastai, Pradip Paik
In this era of advanced technology and innovation, infectious diseases still cause significant morbidity and mortality, which need to be addressed. Despite overwhelming success in the development of vaccines, transmittable diseases such as tuberculosis and AIDS remain unprotected, and the treatment is challenging due to frequent mutations of the pathogens. Formulations of new or existing drugs with polymeric materials have been explored as a promising new approach. Variations in shape, size, surface charge, internal morphology, and functionalization position polymer particles as a revolutionary material in healthcare. Here, an overview is provided of major diseases along with statistics on infection and death rates, focusing on polymer-based treatments and modes of action. Key issues are discussed in this review pertaining to current challenges and future perspectives.
Show moreJan 2024 • Journal of The Electrochemical Society
Gayathri Peta, Nagaprasad Reddy Samala, Ortal Breuer, Rajashree Konar, Yuval Elias, Ilya Grinberg, Miryam Fayena-Greenstein, Doron Aurbach
Organic solid electrolytes for rechargeable batteries are usually produced by dissolving or suspending all components and casting. For decades, acetonitrile has been widely used despite its rapid reaction with alkali metals, forming toxic products such as cyanide. Using large amounts of acetonitrile for industrial applications may pose health and environmental concerns. In addition, researchers claim that even if the solid electrolyte membranes contain residual trace water, this may positively affect the transport properties of Na ions in PEO, and those batteries with electrolytes containing trace water showed significantly improved electrochemical performance. Here, an aqueous medium was considered for casting solid polymer electrolyte membranes. Na ions conducting membranes produced with water were characterized and compared to traditional ones, produced with organic solvents. Spectral studies and …
Show moreJan 2024
Bidisha Tah, Amir Berman, Saja Nasser, Jürgen Jopp, Gil Goobes, Anna Stepansky, Yehonatan Glick
Organisms use a diverse range of organic-inorganic hybrid materials for a variety of purposes, including mechanical support, navigation and protection. These materials are mostly crystalline and are characterized by unique composition, polymorph, crystallite size, shape and crystallographic orientation. The crystalline biominerals are generally formed through amorphous, hydrated transient minerals, but in some, the amorphous phases are stable and persist. Using a biomimetic approach, we address aspects of biological mineralization in vitro and gain insight into the processes and interactions that play roles in the natural systems, in-vivo. In this work, we demonstrate two essential but conflicting methods that are likely to act simultaneously in many mineralizing systems. These are directed crystal nucleation on organic templates, and on the other hand, crystal inhibition to produce the transient amorphous phase. The experimental method in this project mimics aspects of biomineralization processes of calcium carbonate (CaCO3) nucleation. Polydiacetylene (PDA) – a robust, linear conjugated polymer, made from amphiphilic long-chain diacetylene monomers, which upon surface compression, followed by UV polymerization form an ultrathin, stable monolayer structure. PDA simulates the organic template for the CaCO3 crystallization in our experimental system in that it exposed a dense array of acidic groups in well-defined orientation and being a semi-rigid template surface. On PDA templates, calcite crystals nucleate from a (01.2) face and in every single domain of the PDA film they are all coaligned with the crystals' a-axes oriented parallel to …
Show moreJan 2024 • ACS Applied Bio Materials
Ilana Perelshtein, Sivan Shoshani, Gila Jacobi, Michal Natan, Nataliia Dudchenko, Nina Perkas, Maria Tkachev, Rossella Bengalli, Luisa Fiandra, Paride Mantecca, Kristina Ivanova, Tzanko Tzanov, Ehud Banin, Aharon Gedanken
Catheter-associated urinary tract infections (CAUTI) are among the most common bacterial infections associated with prolonged hospitalization and increased healthcare expenditures. Despite recent advances in the prevention and treatment of these infections, there are still many challenges remaining, among them the creation of a durable catheter coating, which prevents bacterial biofilm formation. The current work reports on a method of protecting medical tubing endowed with antibiofilm properties. Silicone catheters coated sonochemically with ZnO nanoparticles (NPs) demonstrated excellent antibiofilm effects. Toward approval by the European Medicines Agency, it was realized that the ZnO coating would not withstand the regulatory requirements of avoiding dissolution for 14 days in artificial urine examination. Namely, after exposure to urine for 14 days, the coating amount was reduced by 90%. Additional …
Show moreJan 2024 • arXiv preprint arXiv:2401.05532
Zohar Schwartzman-Nowik, Dorit Aharonov, Eliahu Cohen
The concept of weak value exhibits numerous intriguing characteristics, leading to unexpected and potentially advantageous phenomena. In this paper, we analyze, from a computational perspective, the performance of the weak measurement protocol for measuring the weak value within various noise channels. A mathematical framework is developed for addressing the less explored case of noise acting on the primary rather than probe system. We pinpoint specific instances where the sensitivity to noise is reduced quadratically with the weak measurement protocol while this cannot be achieved with the standard measurement protocol. Specifically, when confronted with the challenge of learning an operator under the influence of either a Pauli noise channel, a unital noise channel, or an amplitude and phase damping channel, the weak measurement of the weak value can yield significant benefits. Notably, in the first two cases, and especially in the context of the unital noise channel, initializing the system in the maximally mixed state (but postselecting it in a pure state) has proven to be particularly advantageous.
Show moreJan 2024 • MOLECULAR BIOLOGY OF THE CELL 35 (1), 2024
S Nadav Eliyahu, C Bohrer, S Salminen, S Mattola, M Vihinen-Ranta, Y Shav-Tal